Maps & Data
Human Chromosome 13 Maps & Data
How the maps are generated
Our approach involves hybridization of the inter-Alu
PCR products of CEPH YACs to a chromosome 13 cosmid library
(Los Alamos LA13NC01). All cosmids identified in a YAC bin
are hybridized to each other (via riboprobes generated from
their ends) to establish cosmid contigs. From sequence at one
end of a subset of these cosmids, we generate STSs. Finally,
assorted genes, cDNAs and other markers have been hybridized
or PCR'd to CH13 YACs and occasionally to cosmids. Thus, there
are several relationships which exist and are displayed in this
database:
- YAC<=>cosmid (YACs and cosmids are named according
to their positions in the CEPH and Los Alamos library arrays.)
- cosmid<=>cosmid
- STS<=>YAC (By definition, the STS name is the CH13
cosmid from which it was derived. Thus, this also provides
information on cosmid<=>YAC relationships.)
- Marker<=>YAC (Marker names are highly variable,
and depend on the naming conventions established by GDB or
individual investigators.)
- Other relationships (e.g., YAC<=>YAC)
Raw Data Files
Clicking on the links below will fetch you the corresponding raw data file.
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